PhylOPDb

Phylogenetic Oligonucleotide Probe Database. Provides a convivial and easy-to-use web interface to browse both regular and explorative 16S rRNA-targeted probes.

Topic

Probes and primers;Phylogenetics;Microarray experiment

Detail

  • Operation: Microarray probe design;PCR primer design

  • Software interface: Web application;Database portal

  • Language: PHP;Javascript;SQL;;

  • License: -

  • Cost: -

  • Version name: -

  • Credit: Auvergne Regional Council, the European Regional Development Fund, the French ‘Direction Générale de l’Armement’ (DGA) and the program Investissements davenir AMI 2011 VALTEX. Funding for open access charge: LIMOS, Clermont Université.

  • Input: -

  • Output: -

  • Contact: pierre.peyret@udamail.fr

  • Collection: -

  • Maturity: -

Publications

  • PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.
  • Jaziri F, et al. PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification. PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification. 2014; 2014:bau036. doi: 10.1093/database/bau036
  • https://doi.org/10.1093/database/bau036
  • PMID: 24771669
  • PMC: PMC4000467

Download and documentation

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