PhyloPars

Allows for easy, efficient estimation of metabolic parameters as inferred from observations on species that are phylogenetically related.

Topic

Endocrinology and metabolism;Phylogeny;Phylogenetics;Genotype and phenotype

Detail

  • Operation: Phylogenetic footprinting / shadowing;Species frequency estimation;Relation inference;Phylogenetic species tree construction

  • Software interface: Web user interface

  • Language: -

  • License: -

  • Cost: -

  • Version name: -

  • Credit: Computational Life Sciences program of the Netherlands Organisation for Scientific Research (NWO) (grant number 635.100.009 to J.B.); ENFIN, a Network of Excellence funded by the European Commission within its FP6 Programme, under the thematic area ‘Life sciences, genomics and biotechnology for health’ (contract number LSHG-CT-2005-518254 to B.B. and J.H.). The open access charges have been waived by OUP.

  • Input: -

  • Output: -

  • Contact: ibivu@few.vu.nl

  • Collection: -

  • Maturity: -

Publications

  • PhyloPars: estimation of missing parameter values using phylogeny.
  • Bruggeman J, et al. PhyloPars: estimation of missing parameter values using phylogeny. PhyloPars: estimation of missing parameter values using phylogeny. 2009; 37:W179-84. doi: 10.1093/nar/gkp370
  • https://doi.org/10.1093/nar/gkp370
  • PMID: 19443453
  • PMC: PMC2703881

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