PyBioMed

PyBioMed is a software library containing APIs for calculating the protein, DNA, RNA, chemical descriptors, and interactions.

Topic

Cheminformatics;Protein interactions;Molecular modelling;DNA;Proteins;Small molecules;Data visualisation

Detail

  • Operation: Protein property calculation

  • Software interface: Library

  • Language: Python

  • License: BSD-3-Clause

  • Cost: Free

  • Version name: -

  • Credit: The National Natural Science Foundation of China,the Project of Innovation-driven Plan in Central South University, the Postdoctoral Science Foundation of Central South University, the Chinese Postdoctoral Science Foundation, the Key Laboratory of Special Medicine Food Process in Hunan Province.

  • Input: -

  • Output: -

  • Contact: gadsby@163.com, biomed@csu.edu.cn, oriental-cds@163.com

  • Collection: -

  • Maturity: -

Publications

  • PyBioMed: a python library for various molecular representations of chemicals, proteins and DNAs and their interactions.
  • Dong J, Yao ZJ, Zhang L, Luo F, Lin Q, Lu AP, Chen AF, Cao DS. PyBioMed: a python library for various molecular representations of chemicals, proteins and DNAs and their interactions. J Cheminform. 2018 Mar 20;10(1):16. doi: 10.1186/s13321-018-0270-2. PMID: 29556758; PMCID: PMC5861255.
  • https://doi.org/10.1186/s13321-018-0270-2
  • PMID: 29556758
  • PMC: PMC5861255

Download and documentation

< Back to DB search