SChloro

SChloro is a web-based tool for sub-chloroplastic protein localization, such as inner, outer, and thylakoid membranes, thylakoid lumen, stroma, and plastoglobule.

Topic

Protein targeting and localisation;Bioinformatics;Plant biology

Detail

  • Operation: Protein subcellular localisation prediction

  • Software interface: Web service

  • Language: Python

  • License: GNU General Public License v3

  • Cost: Free

  • Version name: -

  • Credit: PRIN 2010-2011 project, Italian MIUR, COST BMBS Action TD1101 and Action BM1405, European Union RTD Framework Program, PON projects, PAN Lab PONa3_00166, Italian Miur, FARB UNIBO 2012.

  • Input: FASTA

  • Output: -

  • Contact: Castrense Savojardo savojard@biocomp.unibo.it, Castrense Savojardo savojard@biocomp.unibo.it, Castrense Savojardo gigi@biocomp.unibo.it

  • Collection: -

  • Maturity: -

Publications

  • SChloro: directing Viridiplantae proteins to six chloroplastic sub-compartments.
  • Savojardo C, Martelli PL, Fariselli P, Casadio R. SChloro: directing Viridiplantae proteins to six chloroplastic sub-compartments. Bioinformatics. 2017 Feb 1;33(3):347-353. doi: 10.1093/bioinformatics/btw656. PMID: 28172591; PMCID: PMC5408801.
  • https://doi.org/10.1093/bioinformatics/btw656
  • PMID: 28172591
  • PMC: PMC5408801

Download and documentation

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