SNAP

A gene prediction tool loosely based on HMM. It has functionality to generate graphical plots.

Topic

Biology, Genetics, DNA polymorphism

Detail

  • Operation: Gene prediction

  • Software interface: Command-line interface

  • Language: C

  • License: GNU GPL

  • Cost: -

  • Version name: -

  • Credit: Johnson AD, Handsaker RE, Pulit SL, Nizzari MM, O'Donnell CJ, de Bakker PI.

  • Input: -

  • Output: -

  • Contact: ifkorf at ucdavis.edu

  • Collection: -

  • Maturity: -

Publications

  • SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap.
  • Johnson AD, et al. SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap. SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap. 2008; 24:2938-9. doi: 10.1093/bioinformatics/btn564
  • https://doi.org/10.1093/bioinformatics/btn564
  • PMID: 18974171
  • PMC: PMC2720775

Download and documentation

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