Scribl

Scribl is a web-based library that enables users to access, analyze, and visualize large, remotely stored genomic data with an interactive experience similar to desktop applications. By leveraging HTML5 technology, Scribl allows for developing specialized yet lightweight applications that empower researchers to conduct customized data analyses and views to address specific biological questions. This helps researchers to more effectively answer biological questions than what is currently possible with existing genome browsers.

Topic

Pipelines;Genomics;Assembly;DNA

Detail

  • Operation: Sequence assembly

  • Software interface: Graphical user interface

  • Language: Java

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: National Institutes of Health (NIH), PhRMA Foundation Research Starter Grant for Informatics.

  • Input: -

  • Output: -

  • Contact: Gabor Marth gabor.marth@bc.edu

  • Collection: -

  • Maturity: -

Publications

  • Scribl: an HTML5 Canvas-based graphics library for visualizing genomic data over the web.
  • Miller CA, et al. Scribl: an HTML5 Canvas-based graphics library for visualizing genomic data over the web. Scribl: an HTML5 Canvas-based graphics library for visualizing genomic data over the web. 2013; 29:381-3. doi: 10.1093/bioinformatics/bts677
  • https://doi.org/10.1093/bioinformatics/bts677
  • PMID: 23172864
  • PMC: PMC3562066

Download and documentation

    Currently not available or not maintained.

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