TASSEL

A tool to evaluate trait associations, linkage disequilibrium, and evolutionary patterns.

Topic

GWAS study, Mapping

Detail

  • Operation: Linkage analysis, linkage disecquilibrium calculation

  • Software interface: Command-line interface, Desktop graphical user interface

  • Language: Java

  • License: GNU Lesser General Public License v2.1

  • Cost: Free

  • Version name: 5.0

  • Credit: Peter J. Bradbury, Zhiwu Zhang Dallas E. Kroon Terry M. Casstevens Yogesh Ramdoss Edward S. Buckler

  • Input: -

  • Output: -

  • Contact: Tassel User Group tassel at googlegroups.com, Terry Casstevens tmc46 at cornell.edu, Peter Bradbury pjb39 at cornell.edu, Ed Buckler esb33 at cornell.edu

  • Collection: -

  • Maturity: -

Publications

  • TASSEL: software for association mapping of complex traits in diverse samples.
  • Bradbury PJ, et al. TASSEL: software for association mapping of complex traits in diverse samples. TASSEL: software for association mapping of complex traits in diverse samples. 2007; 23:2633-5. doi: 10.1093/bioinformatics/btm308
  • https://doi.org/10.1093/bioinformatics/btm308
  • PMID: 17586829
  • PMC: -

Download and documentation

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