ThunderSTORM

ThunderSTORM is a modular and open-source plug-in for ImageJ designed to automate the analysis, processing, and visualization of data acquired by single-molecule localization microscopy methods such as PALM and STORM. It offers various processing and post-processing methods for customization of the analysis, and tools for the creation of simulated data and performance evaluation of localization algorithms using Monte Carlo simulations.

Topic

Imaging;Biological imaging;Medical imaging

Detail

  • Operation: Image analysis

  • Software interface: Library

  • Language: Java

  • License: GNU General Public License v3.0

  • Cost: Free

  • Version name: 1.3

  • Credit: The Czech Science Foundation, Charles University, the European Regional Development Fund, BIOCEV , the European Social Fund.

  • Input: -

  • Output: -

  • Contact: Guy M. Hagen guy.hagen@lf1.cuni.cz

  • Collection: -

  • Maturity: Stable

Publications

  • ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging.
  • Ovesný M, et al. ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging. ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging. 2014; 30:2389-90. doi: 10.1093/bioinformatics/btu202
  • https://doi.org/10.1093/bioinformatics/btu202
  • PMID: 24771516
  • PMC: PMC4207427

Download and documentation

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