VisualCNA

VisualCNA is a PyMOL plugin that facilitates the visualization of the results obtained from constraint network analysis (CNA) for the analysis of the relationship between a biomolecule's structure, flexibility, stability, and function. This plug-in allows for interactive protein engineering aimed at improving thermostability and is freely available under GPL and academic licenses. The tool also allows the setup of CNA runs and analysis of CNA results, linking plots with molecular graphics representations.

Topic

Molecular modelling;Protein structure analysis;Molecular interactions, pathways and networks

Detail

  • Operation: Protein modelling;Pathway or network analysis

  • Software interface: Library

  • Language: -

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: Ministry of Innovation, Science and Research of North Rhine-Westphalia and Heinrich-Heine-University within the CLIB-Graduate Cluster Industrial Biotechnology.

  • Input: -

  • Output: -

  • Contact: gohlke@uni-duesseldorf.de

  • Collection: -

  • Maturity: -

Publications

  • VisualCNA: a GUI for interactive constraint network analysis and protein engineering for improving thermostability.
  • Rathi PC, et al. VisualCNA: a GUI for interactive constraint network analysis and protein engineering for improving thermostability. VisualCNA: a GUI for interactive constraint network analysis and protein engineering for improving thermostability. 2015; 31:2394-6. doi: 10.1093/bioinformatics/btv139
  • https://doi.org/10.1093/bioinformatics/btv139
  • PMID: 25770091
  • PMC: -

Download and documentation

    Currently not available or not maintained.

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