bModelTest

bModelTest is a software tool to test, compare, infer, and marginalize phylogenetic models for BEAST 2. The bModelTest algorithm uses trans-dimensional Markov chain Monte Carlo (MCMC).

Topic

Phylogenetics;Statistics and probability;Evolutionary biology

Detail

  • Operation: Phylogenetic tree comparison

  • Software interface: Graphical user interface

  • Language: Javascript

  • License: GNU Lesser General Public License v2

  • Cost: Free

  • Version name: 1.2.0

  • Credit: Rutherford fellowship (http:--www.royalsociety.org.nz-programmes-funds-rutherford-discovery-) from the Royal Society of New Zealand awarded.

  • Input: -

  • Output: -

  • Contact: Remco R. Bouckaert remco@cs.auckland.ac.nz

  • Collection: BEAST 2

  • Maturity: Stable

Publications

  • bModelTest: Bayesian phylogenetic site model averaging and model comparison.
  • Bouckaert RR, Drummond AJ. bModelTest: Bayesian phylogenetic site model averaging and model comparison. BMC Evol Biol. 2017 Feb 6;17(1):42. doi: 10.1186/s12862-017-0890-6. PMID: 28166715; PMCID: PMC5294809.
  • https://doi.org/10.1186/s12862-017-0890-6
  • PMID: 28166715
  • PMC: PMC5294809

Download and documentation

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