dbBIP
The 'dbBIP' is an integrated and comprehensive online database designed for genetic research related to bipolar disorder (BIP), one of the most common hereditary psychiatric disorders. This database offers unified access to genetic and multi-omics data for in-depth data mining, aiming to facilitate the understanding of the genetic basis of BIP. The dbBIP includes several modules:
1. SNP Module: Contains large-scale genome-wide association study (GWAS) genetic summary statistics and functional annotations relevant to risk variants.
2. Gene Module: Provides information on BIP-related candidate risk genes from various sources.
3. Analysis Module: A user-friendly interface for researchers to analyze their data.
The database also conducts various analyses, such as functional SNP annotation, integration, co-expression, gene expression, tissue expression, protein-protein interaction, and brain expression quantitative trait loci analyses, to shed light on the genetic causes of BIP. Additionally, the dbBIP features a graphical browser with search tools for easy data navigation and access.
Topic
Psychiatry;GWAS study;DNA polymorphism;Gene expression;Data mining
Detail
Operation: Collapsing methods;Database search;Variant calling
Software interface: Database,Web user interface
Language: JavaScript
License: Not stated
Cost: Free
Version name: -
Credit: National Natural Science Foundation of China, National Key Research and Development Program of China.
Input: -
Output: -
Contact: Junfeng Xia jfxia@ahu.edu.cn
Collection: -
Maturity: -
Publications
- dbBIP: a comprehensive bipolar disorder database for genetic research.
- Li X, et al. dbBIP: a comprehensive bipolar disorder database for genetic research. dbBIP: a comprehensive bipolar disorder database for genetic research. 2022; 2022:(unknown pages). doi: 10.1093/database/baac049
- https://doi.org/10.1093/DATABASE/BAAC049
- PMID: 35779245
- PMC: PMC9250320
Download and documentation
Documentation: http://dbbip.xialab.info/dbBIP/Manual
Home page: http://dbbip.xialab.info
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