eccCL

eccCL is a tool for multi-label classification for biomedical applications using Classifier Chains and Ensemble Classifier Chains. The eccCL runs in GPU as a parallelized implementation.

Topic

Bioinformatics;Software engineering;Sequence analysis

Detail

  • Operation: Classification

  • Software interface: Command-line user interface

  • Language: R;Java

  • License: -

  • Cost: Free

  • Version name: 0.1

  • Credit: Straubing Center of Science, the CiM Cluster of Excellence at the University of Münster, the German Research Foundation (DFG) and the Technische Universität München.

  • Input: -

  • Output: -

  • Contact: Mona Riemenschneider m.riemenschneider@wz-straubing.de

  • Collection: -

  • Maturity: -

Publications

  • eccCL: parallelized GPU implementation of Ensemble Classifier Chains.
  • Riemenschneider M, Herbst A, Rasch A, Gorlatch S, Heider D. eccCL: parallelized GPU implementation of Ensemble Classifier Chains. BMC Bioinformatics. 2017 Aug 17;18(1):371. doi: 10.1186/s12859-017-1783-9. PMID: 28818036; PMCID: PMC5561639.
  • https://doi.org/10.1186/s12859-017-1783-9
  • PMID: 28818036
  • PMC: PMC5561639

Download and documentation

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