iCTNet2

iCTNet2 (integrated Complex Traits Networks) is a Cytoscape app for building networks that intetgrate various biological interactions. iCTNet2 package contains datasets from public databases. The Package works with Cytoscape 3.0.

Topic

Molecular interactions, pathways and networks;Ontology and terminology

Detail

  • Operation: Enrichment analysis;Data handling;Scaffolding

  • Software interface: Library

  • Language: Java

  • License: The MIT licence

  • Cost: Free

  • Version name: 2.0.3

  • Credit: The National Multiple sclerosis Society, the National Institutes of Health.

  • Input: -

  • Output: -

  • Contact: Sergio E. Baranzini sergio.baranzini@ucsf.edu

  • Collection: -

  • Maturity: -

Publications

  • iCTNet2: integrating heterogeneous biological interactions to understand complex traits.
  • Wang L, Himmelstein DS, Santaniello A, Parvin M, Baranzini SE. iCTNet2: integrating heterogeneous biological interactions to understand complex traits. F1000Res. 2015 Aug 5;4:485. doi: 10.12688/f1000research.6836.2. PMID: 26834985; PMCID: PMC4706053.
  • https://doi.org/10.12688/f1000research.6836.2
  • PMID: 26834985
  • PMC: PMC4706053

Download and documentation

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