regionReport

The software tool "regionReport" is part of the "derfinder" suite, which introduces an annotation-agnostic approach to RNA-seq analysis through a differentially expressed region (DER) finder. The suite implements a computationally efficient bump-hunting method to identify DERs, allowing genome-scale analyses in numerous samples. "regionReport" enhances this approach by providing a set of data visualizations for expressed region analysis, facilitating the exploration and interpretation of identified DERs. It allows users to visualize and gain insights into differential expression patterns at single-base resolution.