structureViz

structureViz is a Cytoscape> extension to visualize biological networks and analyze molecular structures in the UCSF Chimera tool.

Topic

Systems biology;Biotechnology;Sequence sites, features and motifs;Molecular interactions, pathways and networks

Detail

  • Operation: Visualisation

  • Software interface: Graphical user interface

  • Language: Java

  • License: -

  • Cost: Free

  • Version name: 1.0.6

  • Credit: The National Institutes of Health (NIH)

  • Input: -

  • Output: -

  • Contact: John H. Morris scooter@cgl.ucsf.edu

  • Collection: -

  • Maturity: Stable

Publications

  • structureViz: linking Cytoscape and UCSF Chimera
  • Morris JH, Huang CC, Babbitt PC, Ferrin TE. structureViz: linking Cytoscape and UCSF Chimera. Bioinformatics. 2007 Sep 1;23(17):2345-7. doi: 10.1093/bioinformatics/btm329. Epub 2007 Jul 10. PMID: 17623706.
  • https://doi.org/10.1093/bioinformatics/btm329
  • PMID: 17623706
  • PMC: -

Download and documentation

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