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CNV-seq is a tool for copy number variation (CNV) estimation. The algorithm uses a robust statistical method for the assessment of CNV.


Sequence analysis


  • Operation: Copy number estimation
  • Software interface: Command-line user interface
  • Language: R;Perl
  • Operating system: Linux; Mac OS X
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Maturity: Stable
  • Credit: National University of Singapore FRC grant number R154000265112, National University of Singapore Research Scholarship.
  • Contact: xie _at_;marttit _at_
  • Collection: -


Xie C, Tammi MT "CNV-seq, a new method to detect copy number variation using high-throughput sequencing." BMC Bioinformatics. 2009 Mar 6;10:80.
PMID: 19267900
PMCID: PMC2667514

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