an integrated analysis of allele frequency, allelic imbalance, loss of heterozygosity, long contiguous stretch of homozygosity, and copy number variation or alteration based on SNP probe hybridization intensities and genotypes.
Huang MC, Chuang TP, Chen CH, Wu JY, Chen YT, Li LH, Yang HC "An integrated analysis tool for analyzing hybridization intensities and genotypes using new-generation population-optimized human arrays." BMC Genomics 2016 https://doi.org/10.1186/s12864-016-2478-8
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