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AMF, AgroMarker Finder

AMF, AgroMarker Finder

A tool for restriction site associated data (RAD) analysis for identification of polymorphism, SNPs and indels for rice genome.

Topic

Mapping, Plant biology

Details

  • Operation: Sequence analysis
  • Software interface: Desktop graphical user interface
  • Language: Java
  • Operating system: Linux
  • License: Not stated
  • Cost: Free
  • Version name: 1.1
  • Credit: Fan W, Zong J, Luo Z, Chen M, Zhao X, Zhang D, Qi Y, Yuan Z.
  • Contact: Zheng Yuan zyuan at sjtu.edu.cn
  • Collection: -

Publications

Fan W, Zong J, Luo Z, Chen M, Zhao X, Zhang D, Qi Y, Yuan Z "Development of a RAD-Seq Based DNA Polymorphism Identification Software, AgroMarker Finder, and Its Application in Rice Marker-Assisted Breeding." PLoS ONE 2016; 11(1):e0147187 https://doi.org/10.1371/journal.pone.0147187
PMID: 26799713
PMCID: PMC4723255


Download and documentation








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