Equalizer

A tool to reduces singlenucleotide polymorphism (SNP) bias in Affymetrix microarrays for accurate assessment of germline influence on gene expression.

Topic

Biology, Genetics, DNA polymorphism

Details

Operation: Statistical calculation
Software interface: Command-line interface
Language: C++, R
Operating system: Linux
License: Not stated

Cost

Version name: -

Credit: Quigley D.
Contact: David Quigley David.Quigley at ucsf.edu
Collection: -

Publications

Quigley D "Equalizer reduces SNP bias in Affymetrix microarrays." BMC Bioinformatics 2015 https://doi.org/10.1186/s12859-015-0669-y
PMID: 26223252
PMCID: PMC4518889

Download and documentation

Source: https://github.com/DavidQuigley/Quantita
tiveGenetics
Documentation: https://github.com/DavidQuigley/Quantita
tiveGenetics
Home page: https://github.com/DavidQuigley/Quantita
tiveGenetics

If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News

TOOLS

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched

Database of Bioinformatics Software Tools and Resources.

Ads

Equalizer

Equalizer

Topic

Details

Publications

Download and documentation

TOOLS

1. SNP Tools

2. GWAS Tools

3. Genotype Imputation Tools

4. MSA tools

5. CNV tools

6. WGA tools

7. RNA-seq tools

8. Proteomics Tools

9. Nucleic Acid Structure Analysis Tools

10. Nucleic Acid Sequence Analysis Tools

11. Sequence Logo Tools

12. In-house Software Tools