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FunctSNP

FunctSNP

An R package to link single nucleotide polymorphism (SNP) to function knowledge. dbAutoMaker generates a local database.

Topic

Genetics, Molecular genetics, Genetic variation

Details

  • Operation: Query and retrieval, Modelling and simulation
  • Software interface: Command-line interface
  • Language: R
  • Operating system: Linux, Microsoft Windows, Mac OS X
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: Goodswen SJ, Gondro C, Watson-Haigh NS, Kadarmideen HN.
  • Contact: -
  • Collection: -

Publications

Goodswen SJ, Gondro C, Watson-Haigh NS, Kadarmideen HN "FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases." BMC Bioinformatics 2010 https://doi.org/10.1186/1471-2105-11-311
PMID: 20534127
PMCID: PMC2901372


Download and documentation




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