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JEPEG

JEPEG

Imputes summary statistics at unmeasured eQTLs and tests for the joint effect of measured and imputed eQTLs affecting a gene function/expression on a phenotype.

Topic

Biology, Molecular genetics, Genetic variation

Details

  • Operation: Correlation, Statistical calculation
  • Software interface: Command-line interface
  • Language: -
  • Operating system: Linux
  • License: Not stated
  • Cost: Free
  • Version name: 0.2.0
  • Credit: Lee D, Williamson VS, Bigdeli TB, Riley BP, Fanous AH, Vladimirov VI, Bacanu S.
  • Contact: dlee4 at vcu.edu
  • Collection: -

Publications

Lee D, Williamson VS, Bigdeli TB, Riley BP, Fanous AH, Vladimirov VI, Bacanu SA "JEPEG: a summary statistics based tool for gene-level joint testing of functional variants." Bioinformatics 2015; 31(8):1176-82 https://doi.org/10.1093/bioinformatics/btu816
PMID: 25505091
PMCID: PMC4393522


Download and documentation




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