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PoolHap

PoolHap

A tool for inferring haplotype frequencies from pooled samples.

Topic

Genetics, Statistics and probability

Details

  • Operation: Statistical inference, Haplotype mapping
  • Software interface: Command-line interface
  • Language: Java
  • Operating system: Linux, Microsoft Windows, Mac OS X
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Maturity: Mature
  • Credit: Long Q, Jeffares DC, Zhang Q, Ye K, Nizhynska V, Ning Z, Tyler-Smith C, Nordborg M.
  • Contact: Quan Long quan.long at gmi.oeaw.ac.at
  • Collection: -

Publications

Long Q, Jeffares DC, Zhang Q, Ye K, Nizhynska V, Ning Z, Tyler-Smith C, Nordborg M "PoolHap: inferring haplotype frequencies from pooled samples by next generation sequencing." PLoS ONE 2011; 6(1):e15292 https://doi.org/10.1371/journal.pone.0015292
PMID: 21264334
PMCID: PMC3016441


Download and documentation




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