SNIT

A pipeline to identify microbial strains.

Topic

Biology, Genetics, DNA polymorphism

Operation: Sequence classification
Software interface: Command-line interface, desktop graphical user interface
Language: Java, Perl
Operating system: Linux
License: Not stated

Cost

Vijaya Satya R, Zavaljevski N, Reifman J "SNIT: SNP identification for strain typing." Source Code Biol Med 2011 https://doi.org/10.1186/1751-0473-6-14
PMID: 21902825
PMCID: PMC3182885

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