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SNiPloid

SNiPloid

A tool to discover and validate predicted single nucleotide polymorphisms (SNPs), optimized for allopolyploid species.

Topic

Biology, Genetics, DNA polymorphism

Details

  • Operation: SNP calling
  • Software interface: Web user interface
  • Language: Perl
  • License: "CeCILL public license", a free software license.
  • Cost: -
  • Version name: 3
  • Credit: Peralta M, Combes MC, Cenci A, Lashermes P, Dereeper A.
  • Contact: -
  • Collection: -

Publications

Peralta M, Combes MC, Cenci A, Lashermes P, Dereeper A "SNiPloid: A Utility to Exploit High-Throughput SNP Data Derived from RNA-Seq in Allopolyploid Species." Int J Plant Genomics 2013 https://doi.org/10.1155/2013/890123
PMID: 24163691
PMCID: PMC3791807


Download and documentation




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