A tool to detect sequence variants using heuristics / statistics accoring to set thresholds.
Sequencing, DNA polymorphism
Koboldt DC, Chen K, Wylie T, Larson DE, McLellan MD, Mardis ER, Weinstock GM, Wilson RK, Ding L "VarScan: variant detection in massively parallel sequencing of individual and pooled samples." Bioinformatics 2009; 25(17):2283-5 https://doi.org/10.1093/bioinformatics/btp373
PMID: 19542151
PMCID: PMC2734323
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