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WS-SNPs&GO

WS-SNPs&GO

A web-based tool for prediction of disease associated SNPs. The method is based on support vector machine (SVM) analyses of proteins.

Topic

Molecular genetics, Genetic variation, DNA polymorphism

Details

  • Operation: Prediction and recognition
  • Software interface: Web user interface
  • Language: -
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: Capriotti E, Calabrese R, Fariselli P, Martelli PL, Altman RB, Casadio R.
  • Contact: -
  • Collection: -

Publications

Capriotti E, Calabrese R, Fariselli P, Martelli PL, Altman RB, Casadio R "WS-SNPs&GO: a web server for predicting the deleterious effect of human protein variants using functional annotation." BMC Genomics 2013 https://doi.org/10.1186/1471-2164-14-S3-S6
PMID: 23819482
PMCID: PMC3665478


Calabrese R, Capriotti E, Fariselli P, Martelli PL, Casadio R. "Functional annotations improve the predictive score of human disease-related mutations in proteins." Hum Mutat. 2009 Aug;30(8):1237-44. doi: 10.1002/humu.21047. https://doi.org/10.1002/humu.21047
PMID: 19514061


Capriotti E, Altman RB "Improving the prediction of disease-related variants using protein three-dimensional structure." BMC Bioinformatics 2011 https://doi.org/10.1186/1471-2105-12-S4-S3
PMID: 21992054
PMCID: PMC3194195


Download and documentation




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