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mrsFAST-Ultra

mrsFAST-Ultra

A single nucleotide polymorphism (SNP) aware short read mapper.

Topic

Genomics

Details

  • Operation: Read mapping, Mapping
  • Software interface: Command-line interface
  • Language: C
  • Operating system: Linux
  • License: BSD 3-Clause "New" or "Revised" License
  • Cost: -
  • Version name: 3.3.0
  • Credit: Hach F, Sarrafi I, Hormozdiari F, Alkan C, Eichler EE, Sahinalp SC.
  • Contact: Iman Sarrafi https://github.com/isarrafi/, Faraz Hach https://github.com/fhach
  • Collection: -

Publications

Hach F, Sarrafi I, Hormozdiari F, Alkan C, Eichler EE, Sahinalp SC "mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications." Nucleic Acids Res. 2014; 42(Web Server issue):W494-500 https://doi.org/10.1093/nar/gku370
PMID: 24810850
PMCID: PMC4086126


Download and documentation




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