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ALICO

ALICO

A tool aimed for aiding a development of multiple sequence alignment methods. It generates randomized versions of input sequences preserving its essential features.

Topic

Analysis; sequence analysis; sequence alignment analysis; sequence alignment validation

Details

  • Operation: Sequence alignment; Modelling and simulation; Multiple sequence alignment
  • Software interface: Command-line interface
  • Language: Perl
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: -
  • Contact: uri _at_ maths.usyd.edu.au
  • Collection: -

Publications

Ng P, Keich U "Alignment Constrained Sampling." J Comput Biol. 2011 Feb;18(2):155-68 https://doi.org/10.1089/cmb.2010.0220
PMID: 21314455


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