ClustalO (Galaxy Pasteur)

A Galaxy public web interface at Institut Pasteur includes Clustal Omega wrapper. Institut Pasteur gives free access for external users for over 280 tools.

Topic

Proteomics

Details

Operation: Multiple sequence alignment
Input: Protein sequence in FASTA format
Output: FASTA,CLUSTAL, MSF, PHYLIP, SELEX,Stockholm, Vienna
Software interface: Web user interface
Language: -
Operating system: Linux; Mac OS X; Microsoft Windows
License: GNU GPL v2+

Cost

Version name: -

Credit: -
Contact: galaxy _at_ pasteur.fr
Collection: galaxyPasteur

Publications

Fabien Mareuil, Olivia Doppelt-Azeroual , Hervé Ménager "A public Galaxy platform at Pasteur used as an execution engine for web services [version 1; not peer reviewed]." F1000Research 2017, 6:1030 (poster) https://doi.org/10.7490/f1000research.1114334.1

Download and documentation

Source: http://www.clustal.org/omega/
Documentation: https://galaxy-dev.web.pasteur.fr/tours/
core.galaxy_ui
Home page: https://galaxy.pasteur.fr
Links: /tools/msa/descriptions/Clustal-Omega.ht
ml

If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News

TOOLS

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched

Database of Bioinformatics Software Tools and Resources.

Ads

ClustalO (Galaxy Pasteur)

ClustalO (Galaxy Pasteur)

Topic

Details

Publications

Download and documentation

TOOLS

1. SNP Tools

2. GWAS Tools

3. Genotype Imputation Tools

4. MSA tools

5. CNV tools

6. WGA tools

7. RNA-seq tools

8. Proteomics Tools

9. Nucleic Acid Structure Analysis Tools

10. Nucleic Acid Sequence Analysis Tools

11. Sequence Logo Tools

12. In-house Software Tools