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J-Circos
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J-Circos

J-Circos is a tool to plot 3-dimensional, circular (Circos) figures for chromosomal interactions. J-Circos lets users zoom, to append data to figures, and show details on mouse hover.



J-Circos

J-Circos is a tool to plot 3-dimensional, circular (Circos) figures for chromosomal interactions. J-Circos lets users zoom, to append data to figures, and show details on mouse hover.

Topic

Gene transcripts; Nucleic acid structure analysis; Data visualisation

Details

  • Operation: Structure visualisation
  • Software interface: Graphical user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: GNU Lesser General Public License
    • Cost: Free
  • Version name: -
  • Credit: The Australian Government Department of Health, a Queensland Government Smart Futures Premier’s Fellowship
  • Contact: j.an _at_ qut.edu.au | colleen.nelson _at_ qut.edu.au
  • Collection: -

Publications

An J, Lai J, Sajjanhar A, Batra J, Wang C, Nelson CC "J-Circos: an interactive Circos plotter." Bioinformatics. 2015 May 1;31(9):1463-5. 2014 Dec 24. https://doi.org/10.1093/bioinformatics/btu842
PMID: 25540184


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