cpPredictor is a web-based tool to predict the secondary structures of RNAs. The cpPredictor algorithm computes secondary structures given an RNA template structure and a query RNA sequence. cpPredictor also outputs z-scores.
Nucleic acid structure analysis
Pánek J, Modrák M, Schwarz M "An Algorithm for Template-Based Prediction of Secondary Structures of Individual RNA Sequences." Front Genet 2017 https://doi.org/10.3389/fgene.2017.00147
PMID: 29067038
PMCID: PMC5641303
Jelínek J, Pánek J "cpPredictor: a web server for template-based prediction of RNA secondary structure." Bioinformatics, 2019 https://doi.org/10.1093/bioinformatics/bty753
PMID: 30169571
PMCID: None
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