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MassWiz

MassWiz

MassWiz is a tool to score peptides in tandem mass spectroscopy (MS/MS) data. The MassWiz algorithm computes weights to major ions, continuity of b-y ions, intensities, the supporting neutral losses based on the instrument type, and integrated target-decoy based FDR.

Topic

Proteomics; Proteomics experiment

Details

  • Operation: Target-Decoy; Validation of peptide-spectrum matches; Peptide identification; Peptide database search
  • Input: MGF, pkl, dta
  • Output: CSV
  • Software interface: Graphical user interface
  • Language: Perl
  • Operating system: Linux; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: 1.7.4.2
  • Credit: CSIR SRF grant and CSIRnetwork project on Plasma Proteomics Health, Environmentand Disease.
  • Contact: masswiz _at_ gmail.com
  • Collection: -

Publications

Yadav AK, Kumar D, Dash D "MassWiz: a novel scoring algorithm with target-decoy based analysis pipeline for tandem mass spectrometry." J. Proteome Res. 2011; 10(5):2154-60 https://doi.org/10.1021/pr200031z
PMID: 21417338


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