OMSSA (Open Mass Spectrometry Search Algorithm) is a tool to identify peptides in tandem mass spectrometry (MS/MS) data. The OMSSA algorithm uses a classic probability score to compute specificity. See also The NCBI C++ Toolkit and The NCBI C++ Toolkit Book.
Proteomics
Geer LY, Markey SP, Kowalak JA, Wagner L, Xu M, Maynard DM, Yang X, Shi W, Bryant SH "Open mass spectrometry search algorithm." J Proteome Res. 2004 Sep-Oct;3(5):958-64 https://doi.org/10.1021/pr0499491
PMID: 15473683
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