SteinerNet

SteinerNet is a web-based tool to integrate high-throughput omics data for the discovery of components of response pathways. The SteinerNet is replaced by Omics Integrator. See links.

Topic

Molecular interactions, pathways and networks; Gene expression; Proteomics; Transcription factors and regulatory sites; Model organisms

Details

Operation: Pathway or network analysis; Over-representation analysis; Gene regulatory network analysis; Pathway or network prediction; Gene expression profiling
Software interface: Web user interface
Language: -
Operating system: Linux; Mac OS X; Microsoft Windows
License: Other

Cost

Version name: -

Credit: National Institutes of Health, National Science Foundation.
Contact: -
Collection: -

Publications

Tuncbag N, McCallum S, Huang SS, Fraenkel E "SteinerNet: a web server for integrating 'omic' data to discover hidden components of response pathways." Nucleic Acids Res. 2012; 40(Web Server issue):W505-9 https://doi.org/10.1093/nar/gks445
PMID: 22638579
PMCID: PMC3394335

Download and documentation

Home page: http://fraenkel.mit.edu/steinernet
Links: https://bioinformaticshome.com//tools/pr
oteomics/descriptions/OmicsIntegrato
r.html

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SteinerNet

SteinerNet

Topic

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