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ATGC transcriptomics
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ATGC transcriptomics

ATGC transcriptomics is a tool for visualization and analysis of RNA-seq data.



ATGC transcriptomics

ATGC transcriptomics is a tool for visualization and analysis of RNA-seq data.

Topic

Genomics; Data visualisation

Details

  • Operation: Expression data visualisation
  • Software interface: Web user interface
  • Language: Python
  • Operating system: Linux
  • License: GNU Lesser General Public License version 3
    • Cost: Free
  • Version name: 1.0
  • Credit: Instituto Nacional de Tecnología Agropecuaria, Agencia Española de Cooperación Internacional y Desarrollo, Consejo Nacional de Investigaciones Científicas y Técnicas, BBSRC, Institute Strategic Programme, Marie Curie IRSES Project DEANN.
  • Contact: Sergio Gonzalez gonzalez.sergio _at_ inta.gob.ar | Norma Paniego paniego.norma _at_ inta.gob.ar
  • Collection: -

Publications

Gonzalez S, Clavijo B, Rivarola M, Moreno P, Fernandez P, Dopazo J, Paniego N "ATGC transcriptomics: a web-based application to integrate, explore and analyze de novo transcriptomic data." BMC Bioinformatics. 2017 Feb 22;18(1):121. https://doi.org/10.1186/s12859-017-1494-2
PMID: 28222698
PMCID: PMC5320735


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