Bisque is an R tool to estimate cell composition from single-cell RNA-seq data. The Bisque algorithm uses a regression approach to compute reference expression profiles and, consequently, to learn gene-specific bulk expression transformations for decomposition.
RNA-seq; Transcriptomics
Jew Brandon, Alvarez Marcus, Rahmani Elior, Miao Zong, Ko Arthur, Sul Jae Hoon, Pietiläinen Kirsi H., Pajukanta Päivi, Halperin Eran "Accurate estimation of cell composition in bulk expression through robust integration of single-cell information" bioRxiv https://doi.org/10.1101/669911
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads