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CAMUR

CAMUR

CAMUR (Classifier with Alternative and MUltiple Rule-based models) is a tool to obtain knowledge by extracting several different classification models of gene features in RNA-seq data. The CAMUR algorithm uses an iterative approach to compute a classification model and the power and includes an ad-hoc knowledge database and query tool.

Topic

RNA; Sequencing; RNA-Seq

Details

  • Operation: Classification
  • Software interface: Graphical user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: -
  • Credit: The Italian PRIN GenData, the FLAGSHIP InterOmics project, The Epigenomics Flagship Project.
  • Contact: Paola Bertolazzi paola.bertolazzi _at_ iasi.cnr.it | Emanuel Weitschek emanuel _at_ iasi.cnr.it
  • Collection: -

Publications

Cestarelli V, Fiscon G, Felici G, Bertolazzi P, Weitschek E "CAMUR: Knowledge extraction from RNA-seq cancer data through equivalent classification rules." Bioinformatics 2016; 32(5):697-704 https://doi.org/10.1093/bioinformatics/btv635
PMID: 26519501
PMCID: PMC4795614


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