CRAC is a tool to map RNA-seq reads. The CRAC algorithm uses a k-mer profiling approach to identify substitutions, insertions/deletions (indels), and chimeric junctions.
RNA splicing; Gene structure; RNA-seq
Philippe N, Salson M, Commes T, Rivals E "CRAC: an integrated approach to the analysis of RNA-seq reads." Genome Biol. 2013 Mar 28;14(3):R30. https://doi.org/10.1186/gb-2013-14-3-r30
PMID: 23537109
PMCID: PMC4053775
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