DeepBound is a tool to identify splicing junctions and boundaries of expressed transcript read alignments in RNA-seq data. The DeepBound algorithm uses deep convolutional neural fields.
Machine learning; Transcription factors and regulatory sites; RNA-seq
Shao M, Ma J, Wang S "DeepBound: accurate identification of transcript boundaries via deep convolutional neural fields." Bioinformatics 2017; 33(14):i267-i273 https://doi.org/10.1093/bioinformatics/btx267
PMID: 28881999
PMCID: PMC5870651
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