FlaiMapper is a tool to identify and annotate small non-coding RNAs (sncRNAs) in RNA-seq datasets. The FlaiMapper algorithm uses small RNA-seq read alignments to annotate fragments by peak detection on the start and end position densities. The final step is filtering and a reconstruction.
RNA; RNA-Seq; Functional, regulatory and non-coding RNA; Data submission, annotation and curation
Hoogstrate Y, Jenster G, Martens-Uzunova ES "FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data." Bioinformatics 2015; 31(5):665-73 https://doi.org/10.1093/bioinformatics/btu696
PMID: 25338717
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads