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FunSys
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FunSys

FunSys is a tool for the analysis of differential gene expression (DGE) in RNA-seq data. The FunSys can associate RNA-seq data with proteomics data.



FunSys

FunSys is a tool for the analysis of differential gene expression (DGE) in RNA-seq data. The FunSys can associate RNA-seq data with proteomics data.

Topic

Transcriptomics; RNA-Seq; Gene expression; Molecular genetics

Details

  • Operation: Differential gene expression analysis
  • Software interface: Graphical user interface
  • Language: Java
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
    • Cost: Free
  • Version name: -
  • Credit: Rede Paraense de Genmica eProtemica supported by Fundao de Amparo a Pesquisa doEstado do Par and CNPq Pronex Ncleo Amaznico deExcelncia em Genmica de Microorganismos.
  • Contact: Debmalya Barh dr.barh _at_ gmail.com
  • Collection: -

Publications

de Sá P, Pinto A, Ramos RT, Coimbra N, Baraúna R, Dall'agnol H, Carneiro A, Ranieri A, Valadares A, Azevedo V, Schneider MP, Barh D, Silva A "FunSys: Software for functional analysis of prokaryotic transcriptome and proteome." Bioinformation 2012; 8(11):529-31 https://doi.org/10.6026/97320630008529
PMID: 22829724
PMCID: PMC3398771


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