For better experience, turn on JavaScript!

Heat seq
Home » Tools » RNA-seq Tools and Software » RNA-seq core analysis » Heat seq

Heat seq

Heat seq is a web-based tool to compare ChIP-seq, RNA-seq, and CAGE experiment data with public data.



Heat seq

Heat seq is a web-based tool to compare ChIP-seq, RNA-seq, and CAGE experiment data with public data.

Topic

ChIP-seq; RNA; Sequencing; RNA-Seq; Genomics

Details

  • Operation: Comparison
  • Software interface: Web user interface
  • Language: R/shiny
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: GNU General Public License v3
    • Cost: Free
  • Version name: -
  • Credit: A.J. is a Chancellors fellow and AJ lab is supported by institute strategic funding from Biotechnology and Biological Sciences Research Council (BBSRC, BB-J004235-1). G.D. is funded by the People Programme (Marie Curie ActionsFP7-2007-2013) under REA grant agreement No PCOFUND-GA-2012-600181.
  • Contact: Guillaume Devailly guillaume.devailly _at_ roslin.ed.ac.uk | Anagha Joshi Anagha.Joshi _at_ roslin.ed.ac.uk
  • Collection: -

Publications

Devailly G, Mantsoki A, Joshi A "Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data." Bioinformatics 2016; 32(21):3354-3356 https://doi.org/10.1093/bioinformatics/btw407
PMID: 27378302
PMCID: PMC5079476


Download and documentation







If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News


TOOLS


1. SNP Tools
2. GWAS Tools
3. Genotype Imputation Tools
4. MSA tools
5. CNV tools
6. WGA tools
7. RNA-seq tools
8. Proteomics Tools
9. Nucleic Acid Structure Analysis Tools
10. Nucleic Acid Sequence Analysis Tools
11. Sequence Logo Tools
12. In-house Software Tools

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched




Ads