NPEBseq is an R tool for differential gene expression analysis of RNA-seq data. The NPEBseq algorithm uses an empirical Bayesian model with the prior distribution estimation from the data itself. NPEBseq can estimate differential expression on both gene and exon levels.
RNA-seq; Transcriptomics; Gene expression
Bi Y, Davuluri RV "NPEBseq: nonparametric empirical bayesian-based procedure for differential expression analysis of RNA-seq data." BMC Bioinformatics. 2013 Aug 27;14:262. https://doi.org/10.1186/1471-2105-14-262
PMID: 23981227
PMCID: PMC3765716
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