NSMAP (Nonnegativity and Sparsity constrained Maximum A Posteriori ) is a tool for quantification of expression levels and identification of isoforms in RNA-seq data. The NSMAP algorithm uses A Nonnegativity and Sparsity constrained Maximum APosteriori model, to simultaneous identification of isoform structures and estimation of expression levels.
RNA splicing; RNA-Seq
Xia Z, Wen J, Chang CC, Zhou X "NSMAP: a method for spliced isoforms identification and quantification from RNA-Seq." BMC Bioinformatics. 2011 May 16;12:162. https://doi.org/10.1186/1471-2105-12-162
PMID: 21575225
PMCID: PMC3113944
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