R-SAP is an RNA-seq analysis pipeline tool. R-SAP can quantitate and uses a hierarchical decision-making scheme to characterize various classes of transcripts. R-SAP reports expression levels as RPKM (reads per kilobase of exon model per million mapped reads).
Bioinformatics; Nucleic acids; RNA-Seq; RNA
Mittal VK, McDonald JF "R-SAP: a multi-threading computational pipeline for the characterization of high-throughput RNA-sequencing data." Nucleic Acids Res. 2012; 40(9):e67 https://doi.org/10.1093/nar/gks047
PMID: 22287631
PMCID: PMC3351179
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