RNAscClust a pipeline tool for clustering RNA sequences. The RNAscClust algorithm uses minimum free energy and a graph kernel-based strategy.
RNA; Nucleic acid sites, features and motifs; RNA-seq; Nucleic acid structure analysis
Miladi M, Junge A, Costa F, Seemann SE, Havgaard JH, Gorodkin J, Backofen R "RNAscClust: clustering RNA sequences using structure conservation and graph based motifs." Bioinformatics. 2017 Jul 15;33(14):2089-2096. https://doi.org/10.1093/bioinformatics/btx114
PMID: 28334186
PMCID: PMC5870858
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