Rcount is a tool to quantify the number of reads mapped to a specific gene (feature counts) in RNA-seq datasets. The Rcount algorithm specifically addresses the issue arising from reads mapping to multiple locations.
RNA-Seq; RNA; Sequence sites, features and motifs
Schmid MW, Grossniklaus U "Rcount: simple and flexible RNA-Seq read counting." Bioinformatics 2015; 31(3):436-7 https://doi.org/10.1093/bioinformatics/btu680
PMID: 25322836
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