SINCERA is a pipeline tool for profiling, analysis, and visualization of single-cell RNA-seq (scRNA-seq) data. The SINCERA algorithm has functions for the identification of cell type specific gene signatures, and the computation of driving forces of cell types.
RNA-seq
Guo M, Wang H, Potter SS, Whitsett JA, Xu Y "SINCERA: A Pipeline for Single-Cell RNA-Seq Profiling Analysis." PLoS Comput Biol. 2015 Nov 24;11(11):e1004575. https://doi.org/10.1371/journal.pcbi.1004575
PMID: 26600239
PMCID: PMC4658017
Guo M, Xu Y "Single-Cell Transcriptome Analysis Using SINCERA Pipeline." Methods Mol Biol. 2018;1751:209-222. https://doi.org/10.1007/978-1-4939-7710-9_15
PMID: 29508300
PMCID: PMC6699487
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