SSrGE is a tool for the identification of subpopulations in single-cell RNA-seq (sc-RNA-seq) data. The SSrGE algorithm uses nucleotide variations for the identification.
Gene expression; RNA-seq
Poirion O, Zhu X, Ching T, Garmire LX "Using single nucleotide variations in single-cell RNA-seq to identify subpopulations and genotype-phenotype linkage." Nat Commun. 2018 Nov 20;9(1):4892. https://doi.org/10.1038/s41467-018-07170-5
PMID: 30459309
PMCID: PMC6244222
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