Sailfish is a tool to estimate the abundance of gene isoforms using reference sequences and RNA-seq data sets. The Sailfish uses an alignment-free algorithm and k-mers.
RNA-Seq; RNA; Sequencing; Transcriptomics
Patro R, Mount SM, Kingsford C "Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms." Nat Biotechnol. 2014 May;32(5):462-4. https://doi.org/10.1038/nbt.2862
PMID: 24752080
PMCID: PMC4077321
If you find errors, please report here.
SECTIONS
TutorialsFind thousands of Bioinformatics and Life Science software tools and databases in the newly launched
Ads